2019

1. Dang, H.；Klotz, M.G.; Lovell, C.R; Sievert, S.M. 2019. Editorial: The Responses of Marine Microorganisms, Communities and Ecofunctions to Environmental Gradients. Frontiers in Microbiology. 10:115 .

2. Zhang, C.; You, S.; Dang, H.; Li, Z.L.; Xie Q.L., Zhang D.D. Redox characterization of humins in sediments from the Yangtze Estuary to the East China Sea and their effects on microbial redox reactions. Journal of Soils and Sediments.

Doi: 10.1007/s11368-018-02235-w (2019).

2018

1. Dang, H.; Li, J. Climate tipping-point potential and paradoxical production of methane in a changing ocean. Science China Earth Sciences. 61:1714-1727.

Doi:10.1007/s11430-017-9265-y (2018).

2. Zhang, C.L.; Dang, H.Y.; Azam, F.; B. R.; Legendre, L.; Passow, U.; Polimene, L.; Robinson, C.; Suttle, C.A.; Jiao, N.Z. Evolving paradigms in biological carbon cycling in the ocean. National Science Review. 5:481-499.

Doi:CNKI:SUN:NASR.0.2018-04-015 (2018).

3. Jiao, N.; Liang, Y.; Zhang, Y.; Liu, J.; Zhang, Y.; Zhang, R.; Zhao, M.; Dai, M.; Zhai, W.; Gao, K.; Song, J.; Yuan, D.; Li, C.; Lin, G.; Huang, X.; Yan, H.; Hu, L.; Zhang, Z.; Wang, L.; Cao, C.; Luo, Y.; Luo, T.; Wang, N.; Dang, H.; Wang, D.; Zhang, S. Carbon pools and fluxes in the China Seas and adjacent oceans. Science China Earth Sciences. 61:1535-1563.

2017

1. Dang, H.Y.; Chen, C.T.A. Ecological energetic perspectives on responses of nitrogen-transforming chemolithoautotrophic microbiota to changes in the marine environment. Frontiers in Microbiology. 8:1246.

Doi:10.3389/fmicb.2017.01246 (2017).

2017年之前

1. Dang, H.Y.; Lovell, C.R. Microbial surface colonization and biofilm development in marine environments. Microbiology and Molecular Biology Reviews. 80:91-138.

Doi:10.1128/MMBR.00037-15 (2016).

2. Dang, H.Y.; Huang, R.F.; Jiao, N.Z. 2016. Inspirations from the scientific discovery of the anammox bacteria: A classic example of how scientific principles can guide discovery and development. Science China Earth Sciences. 59:449-455.

3. Zhou, H.; Dang, H.; Klotz, MG. Environmental conditions outweigh geographical contiguity in determining the similarity of nifH-harboring microbial communities in sediments of two disconnected marginal seas. Frontiers in Microbiology. 7:1111.

Doi:10.3389/fmicb.2016.01111 (2016).

4. Wang, L.; Lim, C.K.; Dang, H.Y.; Hanson, T.E.; Klotz MG. D1FHS, the type strain of the ammonia-oxidizing bacterium Nitrosococcus wardiae spec. nov.: Enrichment, isolation, phylogenetic, and growth physiological characterization. Frontiers in Microbiology. 7:512.

Doi:10.3389/fmicb.2016.00512 (2016).

5. Jiang, X.X.; Dang, H.Y.; Jiao, N.Z. Ubiquity and diversity of heterotrophic bacterial nasA genes in diverse marine environments. PLoS ONE. 10:e0117473.

Doi:10.1371/journal.pone.0117473 (2015).

6. Jiao, N.; Legendre, L.; Robinson, C.; Thomas, H.; Luo, Y.W.; Dang, H.; Liu J.; Zhang R.; Tang, K.; Luo T.; Li C.; Wang, X.; Zhang, C. Comment on "Dilution limits dissolved organic carbon utilization in the deep ocean". Science. 350:1483.

Doi:10.1126/science.aab2713 (2015).

7. Zhang, X.Y.; Han, X.X.; Chen, X.L.; Dang, H.Y.; Xie, B.B.; Qin, Q.L.; Shi, M.; Zhou, B.C.; Zhang, Y.Z. Diversity of cultivable protease-producing bacteria in sediments of Jiaozhou Bay, China. Frontiers in Microbiology. 6:1021.

Doi:10.3389/fmicb.2015.01021 (2015).

8. Fang, J.S.; Zhang, Li.; Li, J.T.; Kato, C.; Tamburini, C.; Zhang, Y.Z.; Dang, H.Y.; Wang, G.Y.; Wang, F.P. The POM-DOM piezophilic microorganism continuum (PDPMC)—The role of piezophilic microorganisms in the global ocean carbon cycle. Science China Earth Sciences. 58:106-115.

Doi:10.1007/s11430-014-4985-2 (2015).

9. Shao, S.D.; Luan, X.W.; Dang, H.Y.; Zhou, H.X.; Zhao, Y.K.; Liu, H.T.; Zhang, Y.B.; Dai, L.Q.; Ye, Y.; Klotz, MG. 2014. Deep-sea methane seep sediments in the Okhotsk Sea sustain diverse and abundant anammox bacteria. FEMS Microbiology Ecology. 87:503-516.

10. Dang, H.; Jiao, N. 2014. Perspectives on the microbial carbon pump with special reference to microbial respiration and ecosystem efficiency in large estuarine systems. Biogeosciences. 11:3887-3898.

11. Jiao, N.; Robinson, C.; Azam, F.; Thomas, H.; Baltar, F.; Dang, H.; Hardman-Mountford, N.J.; Johnson, M.; Kirchman, D.L.; Koch, B.P.; Legendre, L.; Li, C.; Liu, J.; Luo, T.; Luo, Y.W.; Mitra, A.; Romanou, A.; Tang, K.; Wang, X.; Zhang, C.; Zhang, R. Mechanisms of microbial carbon sequestration in the ocean-future research directions. Biogeosciences. 11:5285-5306.

Doi:10.5194/bg-11-5565-2014 (2014).

12. Dang, H.Y.; Zhou, H.X.; Yang, J.Y.; Ge, H.M.; Jiao, N.Z.; Luan, X.W.; Zhang, C.L.; Klotz, M.G. 2013. Thaumarchaeotal signature gene distribution in sediments of the northern South China Sea: an indicator of the metabolic intersection of the marine carbon, nitrogen, and phosphorus cycles? Applied and Environmental Microbiology. 79:2137-2147.

13. Dang, H.Y.; Yang, J.Y.; Li, J.; Luan, X.W.; Zhang, Y.B.; Gu, G.Z.; Xue, R.R.; Zong, M.Y.; Klotz, M.G. Environment-dependent distribution of the sediment nifH-harboring microbiota in the northern South China Sea. Applied and Environmental Microbiology. 79:121-132.

Doi:10.1128/AEM.01889 (2013).

14. Dang, H.Y.; Zhou, H.X.; Zhang, Z.N.; Yu, Z.S.; Hua, E.; Liu, XS.; Jiao, NZ. Molecular detection of Candidatus Scalindua pacifica and environmental responses of sediment anammox bacterial community in the Bohai Sea, China. PLoS ONE. 8:e61330.

Doi:10.1371/journal.pone.0061330 (2013).

15. Yang, J.Y.; Dang, H.Y.; Lu, J.R. Improving genetic immobilization of a cellulase on yeast cell surface for bioethanol production using cellulose. Journal of Basic Microbiology. 53:381-389.

Doi:10.1002/jobm.201100602 (2013).

16. Zhao, J.Y.; Dang, H.Y. Coastal seawater bacteria harbor a large reservoir of plasmid-mediated quinolone resistance determinants in Jiaozhou Bay, China. Microbial Ecology. 64:187-199.

Doi:10.2307/41489799 (2012).

17. Li, P.Y.; Xie, B.B.; Zhang, X.Y.; Qin, Q.L.; Dang, H.Y.; Wang, X.M.; Chen, X.L.; Yu, J.; Zhang, Y.Z.; Genetic structure of three fosmid-fragments encoding 16S rRNA genes of the Miscellaneous Crenarchaeotic Group (MCG): implications for physiology and evolution of marine sedimentary archaea. Environmental Microbiology. 14:467-479.

Doi:10.1111/j.1462-2920.2011.02637.x (2012).

18. Ge, H.M.; Zhang, C.L.; Dang, H.Y.; Zhu, C.; Jia, G.D. Distribution of tetraether lipids in surface sediments of the northern South China Sea: Implications for TEX86 proxies. Geoscience Frontiers. 4:223-229.

Doi:10.1016/j.gsf.2012.10.002 (2012).

19. Zhang, Y.J.; Zhang, X.Y.; Zhao, H.L.; Zhou, M.Y.; Li, H.J.; Gao, Z.M.; Chen, X.L.; Dang, H.Y.; Zhang, Y.Z. Idiomarina maris sp. nov., a marine bacterium isolated from sediment. International Journal of Systematic and Evolutionary Microbiology. 62:370-375.

Doi:10.1099/ijs.0.027896-0 (2012).

20. Yang, J.Y.; Dang, H.Y. Cloning and characterization of a novel cold-active endoglucanase establishing a new subfamily of glycosyl hydrolase family 5 from a psychrophilic deep-sea bacterium. FEMS Microbiology Letters. 325:71-76.

Doi:10.1111/j.1574-6968.2011.02413.x (2011).

21. Zhao, J.; Dang, H. Identification of a globally distributed clinical streptomycin-resistance plasmid and other resistance determinants in a coastal bay of China. Letters in Applied Microbiology. 52:1-8.

Doi:10.1111/j.1472-765X.2010.02958.x (2011).

22. Dang, H.Y.; Chen, R.P.; Wang, L.; Shao, S.D.; Dai, L.Q.; Ye, Y.; Guo, L.Z.; Huang, G.Q.; Klotz MG. Molecular characterization of putative biocorroding microbiota with a novel niche detection of Epsilon- and Zetaproteobacteria in Pacific Ocean coastal seawaters. Environmental Microbiology. 13:3059-3074.

Doi:10.1111/j.1462-2920.2011.02583.x (2011).

23. Chen, R.P.; Guo, L.Z.; Dang, H.Y. Gene cloning, expression and characterization of a cold-adapted lipase from a psychrophilic deep-sea bacterium Psychrobacter sp. C18. World Journal of Microbiology and Biotechnology. 27:431-441.

Doi:10.1007/s11274-010-0475-7 (2011).

24. Campbell, M.A.; Chain, PSG.; Dang, H.Y.; Sheikh, A.F.E.; Norton, J.M.; Ward, N.L.; Ward, B.B.; Klotz, M.G. Nitrosococcus watsonii sp. nov., a new species of marine obligate ammonia-oxidizing bacteria that is not omnipresent in the world’s oceans: calls to validate the names 'Nitrosococcus halophilus' and 'Nitrosomonas mobilis'. FEMS Microbiology Ecology. 76:39-48.

Doi:10.1111/j.1574-6941.2010.01027.x (2011).

25. Liu, J.G.; Zhang, Z.Q.; Liu, Z.Q.; Zhu, H.; Dang, H.Y.; Lu, J.R.;Cui Z.F. Production of cold-adapted amylase by marine bacterium Wangia sp. C52: Optimization, modeling, and partial characterization. Marine Biotechnology. 13:837-844.

Doi:10.1007/s10126-010-9360-5 (2011).

26. Cao, H.L.; Li, M.; Dang, H.Y.; Gu, J.D. Responses of aerobic and anaerobic ammonia/ammonium-oxidizing microorganisms to anthropogenic pollution in coastal marine environments. Methods in Enzymology. 496:35-62.

Doi:10.1016/B978-0-12-386489-5.00002-6 (2011).

27. Li, H.J.; Zhang, X.Y.; Zhang, Y.J.; Zhou, M.Y.; Gao, Z.M.; Chen, X.L.; Dang, H.Y.; Zhang, Y.Z. Rheinheimera nanhaiensis sp. nov., isolated from marine sediments, and emended description of the genus Rheinheimera Brettar et al. 2002 emend. Merchant et al. 2007. International Journal of Systematic and Evolutionary Microbiology. 61:1016-1022.

Doi:10.1099/ijs.0.019281-0 (2011).

28. Zhao, J.Y.; Dang, H.Y. 2011. Antibiotic resistance in mariculture environments of China. In Meredith E. Daniels (ed.): Encyclopedia of Immunology Research. ISBN: 978-1-61324-883-6. Nova Science Publishers, New York, USA. (book chapter)

29. Liu, J.G.; Zhang, Z.Q.; Dang, H.Y.; Lu, J.R.; Cui, ZF. Isolation and characterization of a cold-active amylase from marine Wangia sp. C52. African Journal of Microbiology Research. 5:1156-1162.

Doi:10.5897/ajmr10.743 (2011).

30. Liu, J.G.; Zhang, Z.Q.; Zhu, H.; Dang, HY.; Lu, J.R.; Cui Z.F. Isolation and characterization of α-amylase from marine Pseudomonas sp. K6-28-040. African Journal of Biotechnology. 10:2733-2740.

Doi:10.1016/j.molcatb.2008.10.011 (2011).

31. Dang, H.Y.; Chen, R.P.; Wang, L.; Guo, L.Z.; Chen, P.P.; Tang, Z.W.; Tian, F.; Li, S.Z.; Klotz, M.G. Environmental factors shape sediment anammox bacterial communities in hypernutrified Jiaozhou Bay, China. Applied and Environmental Microbiology. 76:7036-7047.

Doi:10.1128/AEM.01264-10 (2010).

32. Dang, H.Y.; Li, J.; Chen, R.P.; Wang, L.; Guo, L.Z.; Zhang, Z.N.; Klotz, M.G. Diversity, abundance, and spatial distribution of sediment ammonia-oxidizing Betaproteobacteria in response to environmental gradients and coastal eutrophication in Jiaozhou Bay, China. Applied and Environmental Microbiology. 76:4691-4702.

Doi:10.1128/aem.02563-09 (2010).

33. Dang, H.Y.; Luan, X.W.; Chen, R.P.; Zhang, X.X.; Guo, L.Z.; Klotz, M.G. Diversity, abundance and distribution of amoA-encoding archaea in deep-sea methane seep sediments of the Okhotsk Sea. FEMS Microbiology Ecology. 72:370-385.

Doi:10.1111/j.1574-6941.2010.00870.x (2010).

34. Qin, Q.L.; Zhang, X.Y.; Wang, X.M.; Liu, G.M.; Chen, X.L.; Xie, B.B.; Dang, H.Y.; Zhou, B.C.; Yu, J.; Zhang, Y.Z. The complete genome of Zunongwangia profunda SM-A87 reveals its adaptation to the deep-sea environment and ecological role in sedimentary organic nitrogen degradation. BMC Genomics. 11:247.

Doi:10.1186/1471-2164-11-247 (2010).

35. Dang, H.Y.; Zhu, H.; Wang, J.; Li, T.G. Extracellular hydrolytic enzyme screening of culturable heterotrophic bacteria from deep-sea sediments of the Southern Okinawa Trough. World Journal of Microbiology and Biotechnology. 25:71-79.

Doi:10.1007/s11274-008-9865-5 (2009).

36. Dang, H.Y.; Li, J.; Chen, M.N.; Li, T.G.; Zeng, Z.G.; Yin, X.B. Fine-scale vertical distribution of bacteria in the East Pacific deep-sea sediments determined via 16S rRNA gene T-RFLP and clone library analyses. World Journal of Microbiology and Biotechnology. 25:179-188.

Doi:10.1007/s11274-008-9877-1 (2009).

37. Dang, H.Y.; Luan, X.W.; Zhao, J.Y.; Li, J. Diverse and novel nifH and nifH-like gene sequences in the deep-sea methane seep sediments of the Okhotsk Sea. Applied and Environmental Microbiology. 75:2238-2245.

Doi:10.1128/AEM.02556-08 (2009).

38. Dang, H.Y.; Wang, C.Y.; Li, J.; Li, T.G.; Tian, F.; Jin, W.; Ding, Y.S.; Zhang, ZN. Diversity and distribution of sediment nirS-encoding bacterial assemblages in response to environmental gradients in the eutrophied Jiaozhou Bay, China. Microbial Ecology. 58:161-169.

Doi:10.1007/s00248-008-9469-5 (2009).

39. Dang, H.Y.; Zhao, J.Y.; Song, L.S.; Chen, M.N.; Chang, Y.Q. Molecular characterizations of chloramphenicol- and oxytetracycline-resistant bacteria and resistance genes in mariculture waters of China. Marine Pollution Bulletin. 58:987-994.

Doi:10.1016/j.marpolbul.2009.02.016 (2009).

40. Dang, H.; Li, J.; Zhang, X.; Li, T.; Tian, F.; Jin, W. Diversity and spatial distribution of amoA-encoding archaea in the deep-sea sediments of the tropical West Pacific Continental Margin. Journal of Applied Microbiology. 106:1482-1493.

Doi:10.1111/j.1365-2672.2008.04109.x (2009).

41. Zhou, M.Y.; Chen, X.L.; Zhao, H.L.; Dang, H.Y.; Luan, X.W.; Zhang, X.Y.; He, H.L.; Zhou, B.C.; Zhang, Y.Z. Diversity of both the cultivable protease-producing bacteria and their extracellular proteases in the sediments of the South China Sea. Microbial Ecology. 58:582-590.

Doi:10.1007/s00248-009-9506-z (2009).

42. Yang, J.Y.; Lu, J.R.; Dang, H.Y.; Li, Y.; Ge, B.S. Development on ethanol production from xylose by recombinant Saccharomyces cerevisiae. Natural Science. 1:210-215.

Doi: 10.4236/ns.2009.13028 (2009).

43. Zhao, J.Y.; Dang, H.Y. 2009. Antibiotic resistance in mariculture environments of China. In Adriel R. Bonilla and Kaden P. Muniz (eds.): Antibiotic Resistance: Causes and Risk Factors, Mechanisms and Alternatives. ISBN: 978-1-60741-623-4. Nova Science Publishers, New York, USA. (book chapter)

44. Dang, H.Y.; Ren, J.; Song, L.S.; Sun, S.; An, L.G. Dominant chloramphenicol-resistant bacteria and resistance genes in coastal marine waters of Jiaozhou Bay, China. World Journal of Microbiology and Biotechnology. 24:209-217.

Doi:10.1007/s11274-007-9458-8 (2008).

45. Dang, H.Y.; Ren, J.; Song, L.S.; Sun, S.; An, L.G. Diverse tetracycline resistant bacteria and resistance genes from coastal waters of Jiaozhou Bay. Microbial Ecology. 55:237-246.

Doi:10.1007/s00248-007-9271-9 (2008).

46. Dang, H.Y.; Zhang, X.X.; Sun, J.; Li, T.G..; Zhang, Z.N.; Yang GP. Diversity and spatial distribution of sediment ammonia-oxidizing crenarchaeota in response to estuarine and environmental gradients in the Changjiang Estuary and East China Sea. Microbiology. 154:2084-2095.

Doi:10.1099/mic.0.2007/013581-0 (2008).

47. Dang, H.Y.; Li, T.G.; Chen, M.N.; Huang GQ. Cross-ocean distribution of Rhodobacterales bacteria as primary surface colonizers in temperate coastal marine waters. Applied and Environmental Microbiology. 74:52-60.

Doi:10.1128/AEM.01400-07 (2008).

48. Wang, C.Y.; Dang, H.Y.; Ding, Y.S. Incidence of diverse integrons and β-lactamase genes in environmental Enterobacteriaceae isolates from Jiaozhou Bay, China. World Journal of Microbiology and Biotechnology. 24:2889-2896.

Doi:10.1007/s11274-008-9827-y (2008).

49. Li, D.L.; Li, X.M.; Li, T.G.; Dang, H.Y.; Proksch, P.; Wang, B.G. 2008. Benzaldehyde derivatives from Eurotium rubrum, an endophytic fungus derived from the mangrove plant Hibiscus tiliaceus. Chemical & Pharmaceutical Bulletin. 56:1282-1285.

50. Li, D.L.; Li, X.M.; Li, T.G.; Dang, H.Y.; Wang, B.G. 2008. Dioxopiperazine alkaloids produced by the marine mangrove derived endophytic fungus Eurotium rubrum. Helvetica Chimica Acta. 91:1888-1893.

51. Li, Y.; Li, F.; Zhang, X.; Qin, S.; Zeng, Z.; Dang, H.; Qin, Y. Vertical distribution of bacterial and archaeal communities along discrete layers of a deep-sea cold sediment sample at the East Pacific Rise (~13ºN). Extremophiles. 12:573-585.

Doi:10.1007/s00792-008-0159-5 (2008).

52. Dang, H.; Zhang, X.; Song, L.; Chang, Y.; Yang, G. Molecular determination of oxytetracycline-resistant bacteria and their resistance genes from mariculture environments of China. Journal of Applied Microbiology. 103:2580-2592.

Doi:10.1111/j.1365-2672.2007.03494.x (2007).

53. Qin, Q.L.; Zhao, D.L.; Wang, J.; Chen, X.L.; Dang, H.Y.; Li, T.G.; Zhang, Y.Z.; Gao, P.J. Wangia profunda gen. nov., sp. nov., a novel marine bacterium of the family Flavobacteriaceae isolated from southern Okinawa Trough deep-sea sediment. FEMS Microbiology Letters. 271:53-58.

Doi:10.1111/j.1574-6968.2007.00694.x (2007).

54. Dang, H.Y.; Song, L.S.; Chen, M.N.; Chang, Y.Q. Concurrence of cat and tet genes in multiple antibiotic-resistant bacteria isolated from a sea cucumber and sea urchin mariculture farm in China. Microbial Ecology. 52:634-643.

Doi:10.1007/s00248-006-9091-3 (2006).

55. Dang, H.Y.; Zhang, X.X.; Song, L.S.; Chang, Y.Q.; Yang, G.P. Molecular characterizations of oxytetracycline resistant bacteria and their resistance genes from mariculture waters of China. Marine Pollution Bulletin. 52:1494-1503.

Doi:10.1016/j.marpolbul.2006.05.011 (2006).

56. Ren, J.; Dang, H.Y.; Song, L.S.; Sun, S.; An, L.G. Bacterial and cyanobacterial diversities determined by T-RFLP analyses in the Jiaozhou Bay. Acta Oceanologica Sinica. 25:113-123.

Doi:10.1016/j.marchem.2005.09.003 (2006).

57. Young, H.S.; Dang, H.Y.; Lai, Y.; DeRosier, D.J.; Khan, S. Variable symmetry in Salmonella typhimurium flagellar motors. Biophysical Journal. 84:571-577.

Doi:10.1016/S0006-3495(03)74877-2 (2003).

58. Dang, H.Y.; Lovell, C.R. Numerical dominance and phylotype diversity of marine Rhodobacter species during early colonization of submerged surfaces in coastal marine waters as determined by 16S ribosomal DNA sequence analysis and fluorescence in situ hybridization. Applied and Environmental Microbiology. 68:496-504.

Doi:10.1128/AEM.68.2.496-504.2002 (2002).

59. Dang, H.Y.; Lovell, C.R. Seasonal dynamics of particle-associated and free-living marine Proteobacteria in a salt marsh tidal creek as determined using fluorescence in situ hybridization. Environmental Microbiology. 4:287-295.

Doi:10.1046/j.1462-2920.2002.00295.x (2002).

60. Dang, H.Y.; Lovell, C.R. Bacterial primary colonization and early succession on surfaces in marine waters as determined by amplified rRNA gene restriction analysis and sequence analysis of 16S rRNA genes. Applied and Environmental Microbiology. 66:467-475.

Doi:10.1128/aem.66.2.467-475.2000 (2000.)

61. Zhang, X.C.; He, L.R.; Dang, H.Y.; Tan, G.Y. 1991. Mutagenetic action of ethyl methanesulfonate on Spirulina platensis. Acta oceanologica Sinica. 10:625-627.